添加决策树,朴素贝叶斯和回归的sklearn版本,logistic回归的sklearn版本

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chenyyx
2017-07-04 19:59:10 +08:00
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#!/usr/bin/python
# coding: utf8
'''
Created on Oct 27, 2010
Update on 2017-05-18
Logistic Regression Working Module
@author: 小瑶
《机器学习实战》更新地址https://github.com/apachecn/MachineLearning
scikit-learn的例子地址http://scikit-learn.org/stable/modules/linear_model.html#logistic-regression
'''
# 逻辑回归中的 L1 惩罚和稀缺性 L1 Penalty and Sparsity in Logistic Regression
'''
print(__doc__)
import numpy as np
import matplotlib.pyplot as plt
from sklearn.linear_model import LogisticRegression
from sklearn import datasets
from sklearn.preprocessing import StandardScaler
digits = datasets.load_digits()
X, y = digits.data, digits.target
X = StandardScaler().fit_transform(X)
# 将大小数字分类为小
y = (y > 4).astype(np.int)
# 设置正则化参数
for i, C in enumerate((100, 1, 0.01)):
# 减少训练时间短的容忍度
clf_l1_LR = LogisticRegression(C=C, penalty='l1', tol=0.01)
clf_l2_LR = LogisticRegression(C=C, penalty='l2', tol=0.01)
clf_l1_LR.fit(X, y)
clf_l2_LR.fit(X, y)
coef_l1_LR = clf_l1_LR.coef_.ravel()
coef_l2_LR = clf_l2_LR.coef_.ravel()
# coef_l1_LR contains zeros due to the
# L1 sparsity inducing norm
# 由于 L1 稀疏诱导规范coef_l1_LR 包含零
sparsity_l1_LR = np.mean(coef_l1_LR == 0) * 100
sparsity_l2_LR = np.mean(coef_l2_LR == 0) * 100
print("C=%.2f" % C)
print("Sparsity with L1 penalty: %.2f%%" % sparsity_l1_LR)
print("score with L1 penalty: %.4f" % clf_l1_LR.score(X, y))
print("Sparsity with L2 penalty: %.2f%%" % sparsity_l2_LR)
print("score with L2 penalty: %.4f" % clf_l2_LR.score(X, y))
l1_plot = plt.subplot(3, 2, 2 * i + 1)
l2_plot = plt.subplot(3, 2, 2 * (i + 1))
if i == 0:
l1_plot.set_title("L1 penalty")
l2_plot.set_title("L2 penalty")
l1_plot.imshow(np.abs(coef_l1_LR.reshape(8, 8)), interpolation='nearest',
cmap='binary', vmax=1, vmin=0)
l2_plot.imshow(np.abs(coef_l2_LR.reshape(8, 8)), interpolation='nearest',
cmap='binary', vmax=1, vmin=0)
plt.text(-8, 3, "C = %.2f" % C)
l1_plot.set_xticks(())
l1_plot.set_yticks(())
l2_plot.set_xticks(())
l2_plot.set_yticks(())
plt.show()
'''
# 具有 L1-逻辑回归的路径
'''
print(__doc__)
from datetime import datetime
import numpy as np
import matplotlib.pyplot as plt
from sklearn import linear_model
from sklearn import datasets
from sklearn.svm import l1_min_c
iris = datasets.load_iris()
X = iris.data
y = iris.target
X = X[y != 2]
y = y[y != 2]
X -= np.mean(X, 0)
cs = l1_min_c(X, y, loss='log') * np.logspace(0, 3)
print("Computing regularization path ...")
start = datetime.now()
clf = linear_model.LogisticRegression(C=1.0, penalty='l1', tol=1e-6)
coefs_ = []
for c in cs:
clf.set_params(C=c)
clf.fit(X, y)
coefs_.append(clf.coef_.ravel().copy())
print("This took ", datetime.now() - start)
coefs_ = np.array(coefs_)
plt.plot(np.log10(cs), coefs_)
ymin, ymax = plt.ylim()
plt.xlabel('log(C)')
plt.ylabel('Coefficients')
plt.title('Logistic Regression Path')
plt.axis('tight')
plt.show()
'''
# 绘制多项式和一对二的逻辑回归 Plot multinomial and One-vs-Rest Logistic Regression
'''
print(__doc__)
import numpy as np
import matplotlib.pyplot as plt
from sklearn.datasets import make_blobs
from sklearn.linear_model import LogisticRegression
# 制作 3 类数据集进行分类
centers = [[-5, 0], [0, 1.5], [5, -1]]
X, y = make_blobs(n_samples=1000, centers=centers, random_state=40)
transformation = [[0.4, 0.2], [-0.4, 1.2]]
X = np.dot(X, transformation)
for multi_class in ('multinomial', 'ovr'):
clf = LogisticRegression(solver='sag', max_iter=100, random_state=42,
multi_class=multi_class).fit(X, y)
# 打印训练分数
print("training score : %.3f (%s)" % (clf.score(X, y), multi_class))
# 创建一个网格来绘制
h = .02 # 网格中的步长
x_min, x_max = X[:, 0].min() - 1, X[:, 0].max() + 1
y_min, y_max = X[:, 1].min() - 1, X[:, 1].max() + 1
xx, yy = np.meshgrid(np.arange(x_min, x_max, h),
np.arange(y_min, y_max, h))
# 绘制决策边界。为此,我们将为网格 [x_min, x_max]x[y_min, y_max]中的每个点分配一个颜色。
Z = clf.predict(np.c_[xx.ravel(), yy.ravel()])
# 将结果放入彩色图
Z = Z.reshape(xx.shape)
plt.figure()
plt.contourf(xx, yy, Z, cmap=plt.cm.Paired)
plt.title("Decision surface of LogisticRegression (%s)" % multi_class)
plt.axis('tight')
# 将训练点也绘制进入
colors = "bry"
for i, color in zip(clf.classes_, colors):
idx = np.where(y == i)
plt.scatter(X[idx, 0], X[idx, 1], c=color, cmap=plt.cm.Paired)
# 绘制三个一对数分类器
xmin, xmax = plt.xlim()
ymin, ymax = plt.ylim()
coef = clf.coef_
intercept = clf.intercept_
def plot_hyperplane(c, color):
def line(x0):
return (-(x0 * coef[c, 0]) - intercept[c]) / coef[c, 1]
plt.plot([xmin, xmax], [line(xmin), line(xmax)],
ls="--", color=color)
for i, color in zip(clf.classes_, colors):
plot_hyperplane(i, color)
plt.show()
'''
# Logistic Regression 3-class Classifier 逻辑回归 3-类 分类器
'''
print(__doc__)
import numpy as np
import matplotlib.pyplot as plt
from sklearn import linear_model, datasets
# 引入一些数据来玩
iris = datasets.load_iris()
# 我们只采用样本数据的前两个feature
X = iris.data[:, :2]
Y = iris.target
h = .02 # 网格中的步长
logreg = linear_model.LogisticRegression(C=1e5)
# 我们创建了一个 Neighbours Classifier 的实例,并拟合数据。
logreg.fit(X, Y)
# 绘制决策边界。为此我们将为网格 [x_min, x_max]x[y_min, y_max] 中的每个点分配一个颜色。
x_min, x_max = X[:, 0].min() - .5, X[:, 0].max() + .5
y_min, y_max = X[:, 1].min() - .5, X[:, 1].max() + .5
xx, yy = np.meshgrid(np.arange(x_min, x_max, h), np.arange(y_min, y_max, h))
Z = logreg.predict(np.c_[xx.ravel(), yy.ravel()])
# 将结果放入彩色图中
Z = Z.reshape(xx.shape)
plt.figure(1, figsize=(4, 3))
plt.pcolormesh(xx, yy, Z, cmap=plt.cm.Paired)
# 将训练点也同样放入彩色图中
plt.scatter(X[:, 0], X[:, 1], c=Y, edgecolors='k', cmap=plt.cm.Paired)
plt.xlabel('Sepal length')
plt.ylabel('Sepal width')
plt.xlim(xx.min(), xx.max())
plt.ylim(yy.min(), yy.max())
plt.xticks(())
plt.yticks(())
plt.show()
'''
# Logistic function 逻辑回归函数
# 这个类似于咱们之前讲解 logistic 回归的 Sigmoid 函数,模拟的阶跃函数
print(__doc__)
import numpy as np
import matplotlib.pyplot as plt
from sklearn import linear_model
# 这是我们的测试集,它只是一条直线,带有一些高斯噪声。
xmin, xmax = -5, 5
n_samples = 100
np.random.seed(0)
X = np.random.normal(size=n_samples)
y = (X > 0).astype(np.float)
X[X > 0] *= 4
X += .3 * np.random.normal(size=n_samples)
X = X[:, np.newaxis]
# 运行分类器
clf = linear_model.LogisticRegression(C=1e5)
clf.fit(X, y)
# 并且画出我们的结果
plt.figure(1, figsize=(4, 3))
plt.clf()
plt.scatter(X.ravel(), y, color='black', zorder=20)
X_test = np.linspace(-5, 10, 300)
def model(x):
return 1 / (1 + np.exp(-x))
loss = model(X_test * clf.coef_ + clf.intercept_).ravel()
plt.plot(X_test, loss, color='red', linewidth=3)
ols = linear_model.LinearRegression()
ols.fit(X, y)
plt.plot(X_test, ols.coef_ * X_test + ols.intercept_, linewidth=1)
plt.axhline(.5, color='.5')
plt.ylabel('y')
plt.xlabel('X')
plt.xticks(range(-5, 10))
plt.yticks([0, 0.5, 1])
plt.ylim(-.25, 1.25)
plt.xlim(-4, 10)
plt.legend(('Logistic Regression Model', 'Linear Regression Model'),
loc="lower right", fontsize='small')
plt.show()