# Cython:class 和 cdef class,使用 C++ ## class 和 cdef class `class` 定义属性变量比较自由,`cdef class` 可以定义 `cdef` `class` 使用 `__init__` 初始化,`cdef class` 在使用 `__init__` 之前用 `__cinit__` 对 `C` 相关的参数进行初始化。 `cdef class` 中的方法可以是 `def, cdef, cpdef` 三种,只有 `public` 的属性才可以被访问,不可以添加新的属性。 `__dealloc__` 函数类似析构函数,负责释放申请的内存。 `Cython` 属性可以使用关键词 `property` 来定义,然后定义 `__get__` 和 `__set__` 方法来进行获取和设置: ```py property name: def __get__(self): return something def __set__(self): set_something ``` ## 使用 C++ 类 使用 `C++` 类时要加上 `cppclass` 关键词,在编译时 `setup` 中要加上 `language="c++"` 的选项。 假设我们有这样一个 `C++` 类: In [1]: ```py %%file particle_extern.h #ifndef _PARTICLE_EXTERN_H_ #define _PARTICLE_EXTERN_H_ class Particle { public: Particle() : mass(0), charge(0) {} Particle(float m, float c, float *p, float *v); ~Particle() {} float getMass() {return mass; } void setMass(float m) { mass = m; } float getCharge() { return charge; } const float *getVel() { return vel; } const float *getPos() { return pos; } void applyImpulse(float *f, float t); private: float mass, charge; float pos[3], vel[3]; }; #endif ``` ```py Overwriting particle_extern.h ``` In [2]: ```py %%file particle_extern.cpp #include "particle_extern.h" Particle::Particle(float m, float c, float *p, float *v) : mass(m), charge(c) { for (int i=0; i<3; ++i) { pos[i] = p[i]; vel[i] = v[i]; } } void Particle::applyImpulse(float *f, float t) { float newvi; for(int i=0; i<3; ++i) { newvi = vel[i] + t / mass * f[i]; pos[i] = (newvi + vel[i]) * t / 2.; vel[i] = newvi; } } ``` ```py Overwriting particle_extern.cpp ``` 在 `Cython` 中调用这个类: In [3]: ```py %%file particle.pyx import numpy as np cdef extern from "particle_extern.h": cppclass _Particle "Particle": _Particle(float m, float c, float *p, float *v) float getMass() void setMass(float m) float getCharge() const float *getVel() const float *getPos() void applyImpulse(float *f, float t) cdef class Particle: cdef _Particle *thisptr # ptr to C++ instance def __cinit__(self, m, c, float[::1] p, float[::1] v): if p.shape[0] != 3 or v.shape[0] != 3: raise ValueError("...") self.thisptr = new _Particle(m, c, &p[0], &v[0]) def __dealloc__(self): del self.thisptr def apply_impulse(self, float[::1] v, float t): self.thisptr.applyImpulse(&v[0], t) def __repr__(self): args = ', '.join('%s=%s' % (n, getattr(self, n)) for n in ('mass', 'charge', 'pos', 'vel')) return 'particle.Particle(%s)' % args property charge: def __get__(self): return self.thisptr.getCharge() property mass: # Cython-style properties. def __get__(self): return self.thisptr.getMass() def __set__(self, m): self.thisptr.setMass(m) property vel: def __get__(self): cdef const float *_vel = self.thisptr.getVel() cdef float[::1] arr = np.empty((3,), dtype=np.float32) for i in range(3): arr[i] = _vel[i] return np.asarray(arr) property pos: def __get__(self): cdef const float *_pos = self.thisptr.getPos() cdef float[::1] arr = np.empty((3,), dtype=np.float32) for i in range(3): arr[i] = _pos[i] return np.asarray(arr) ``` ```py Overwriting particle.pyx ``` 首先从头文件声明这个类: ```py cdef extern from "particle_extern.h": cppclass _Particle "Particle": _Particle(float m, float c, float *p, float *v) float getMass() void setMass(float m) float getCharge() const float *getVel() const float *getPos() void applyImpulse(float *f, float t) ``` 这里要使用 `cppclass` 关键词,并且为了方便,我们将 `Particle` 类的名字在 `Cython` 中重命名为 `_Particle`。 ```py cdef class Particle: cdef _Particle *thisptr def __cinit__(self, m, c, float[::1] p, float[::1] v): if p.shape[0] != 3 or v.shape[0] != 3: raise ValueError("...") self.thisptr = new _Particle(m, c, &p[0], &v[0]) ``` 为了使用这个类,我们需要定义一个该类的指针,然后用指针指向一个 `_Particle` 对象。 In [4]: ```py %%file setup.py from distutils.core import setup from distutils.extension import Extension from Cython.Distutils import build_ext ext = Extension("particle", ["particle.pyx", "particle_extern.cpp"], language="c++") setup( cmdclass = {'build_ext': build_ext}, ext_modules = [ext], ) ``` ```py Overwriting setup.py ``` 要加上 `language="c++"` 的选项,然后编译: In [5]: ```py !python setup.py build_ext -i ``` ```py running build_ext cythoning particle.pyx to particle.cpp building 'particle' extension C:\Anaconda\Scripts\gcc.bat -DMS_WIN64 -mdll -O -Wall -IC:\Anaconda\include -IC:\Anaconda\PC -c particle.cpp -o build\temp.win-amd64-2.7\Release\particle.o C:\Anaconda\Scripts\gcc.bat -DMS_WIN64 -mdll -O -Wall -IC:\Anaconda\include -IC:\Anaconda\PC -c particle_extern.cpp -o build\temp.win-amd64-2.7\Release\particle_extern.o writing build\temp.win-amd64-2.7\Release\particle.def C:\Anaconda\Scripts\g++.bat -DMS_WIN64 -shared -s build\temp.win-amd64-2.7\Release\particle.o build\temp.win-amd64-2.7\Release\particle_extern.o build\temp.win-amd64-2.7\Release\particle.def -LC:\Anaconda\libs -LC:\Anaconda\PCbuild\amd64 -lpython27 -lmsvcr90 -o "C:\Users\lijin\Documents\Git\python-tutorial\07\. interfacing with other languages\particle.pyd" ``` ```py particle.cpp: In function 'void __Pyx_RaiseArgtupleInvalid(const char*, int, Py_ssize_t, Py_ssize_t, Py_ssize_t)': particle.cpp:14931:59: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:14931:59: warning: format '%s' expects argument of type 'char*', but argument 5 has type 'Py_ssize_t {aka long long int}' [-Wformat] particle.cpp:14931:59: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:14931:59: warning: too many arguments for format [-Wformat-extra-args] particle.cpp: In function 'int __Pyx_BufFmt_ProcessTypeChunk(__Pyx_BufFmt_Context*)': particle.cpp:15498:78: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:15498:78: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:15498:78: warning: too many arguments for format [-Wformat-extra-args] particle.cpp:15550:67: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:15550:67: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:15550:67: warning: too many arguments for format [-Wformat-extra-args] particle.cpp: In function 'PyObject* __pyx_buffmt_parse_array(__Pyx_BufFmt_Context*, const char**)': particle.cpp:15612:69: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:15612:69: warning: format '%d' expects argument of type 'int', but argument 3 has type 'size_t {aka long long unsigned int}' [-Wformat] particle.cpp:15612:69: warning: too many arguments for format [-Wformat-extra-args] particle.cpp: In function 'int __Pyx_GetBufferAndValidate(Py_buffer*, PyObject*, __Pyx_TypeInfo*, int, int, int, __Pyx_BufFmt_StackElem*)': particle.cpp:15797:73: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:15797:73: warning: format '%s' expects argument of type 'char*', but argument 3 has type 'Py_ssize_t {aka long long int}' [-Wformat] particle.cpp:15797:73: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:15797:73: warning: too many arguments for format [-Wformat-extra-args] particle.cpp: In function 'void __Pyx_RaiseTooManyValuesError(Py_ssize_t)': particle.cpp:16216:94: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:16216:94: warning: too many arguments for format [-Wformat-extra-args] particle.cpp: In function 'void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t)': particle.cpp:16222:48: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:16222:48: warning: format '%s' expects argument of type 'char*', but argument 3 has type 'Py_ssize_t {aka long long int}' [-Wformat] particle.cpp:16222:48: warning: too many arguments for format [-Wformat-extra-args] particle.cpp: In function 'int __Pyx_ValidateAndInit_memviewslice(int*, int, int, int, __Pyx_TypeInfo*, __Pyx_BufFmt_StackElem*, __Pyx_memviewslice*, PyObject*)': particle.cpp:16941:50: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:16941:50: warning: format '%s' expects argument of type 'char*', but argument 3 has type 'Py_ssize_t {aka long long int}' [-Wformat] particle.cpp:16941:50: warning: unknown conversion type character 'z' in format [-Wformat] particle.cpp:16941:50: warning: too many arguments for format [-Wformat-extra-args] ``` In [6]: ```py import particle ``` 注意这里类型要设成 `float32`,因为 `C++` 程序中接受的是 `float` 类型,默认是 `float64(double)` 类型: In [7]: ```py import numpy as np pos = vel = np.arange(3., dtype='float32') mass = 1.0 charge = 2.0 p = particle.Particle(mass, charge, pos, vel) p ``` Out[7]: ```py particle.Particle(mass=1.0, charge=2.0, pos=[ 0\. 1\. 2.], vel=[ 0\. 1\. 2.]) ``` 调用 `apply_impulse` 方法: In [8]: ```py p.apply_impulse(np.arange(3., dtype='float32'), 1.0) p ``` Out[8]: ```py particle.Particle(mass=1.0, charge=2.0, pos=[ 0\. 1.5 3\. ], vel=[ 0\. 2\. 4.]) ``` 查看质量: In [9]: ```py p.mass ``` Out[9]: ```py 1.0 ``` 修改质量: In [10]: ```py p.mass = 3.0 ``` 查看 `charge`: In [11]: ```py p.charge ``` Out[11]: ```py 2.0 ``` 因为 `charge` 没有定义 `__set__` 方法,所以它是只读的属性,不能进行修改。 In [12]: ```py import zipfile f = zipfile.ZipFile('07-05-particle.zip','w',zipfile.ZIP_DEFLATED) names = ['particle.pyx', 'particle_extern.cpp', 'particle_extern.h', 'setup.py'] for name in names: f.write(name) f.close() !rm -f setup*.* !rm -f particle*.* !rm -rf build ```